Modules specific to Niagara
Jump to navigation
Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.
2018a
Module | Versions (2018a) | Documentation | Description |
---|---|---|---|
anaconda2 | 5.1.0 | Python | Built to complement the rich, open source Python community, the Anaconda platform provides an enterprise-ready data analytics platform that empowers companies to adopt a modern open data science analytics architecture
|
anaconda3 | 5.2.0 5.1.0 2018.12 | Python | Built to complement the rich, open source Python community, the Anaconda platform provides an enterprise-ready data analytics platform that empowers companies to adopt a modern open data science analytics architecture
|
antlr | 2.7.7 | ANTLR, ANother Tool for Language Recognition, (formerly PCCTS) is a language tool that provides a framework for constructing recognizers, compilers, and translators from grammatical descriptions containing Java, C#, C++, or Python actions
| |
ants | 2.3.1 | ANTs extracts information from complex datasets that include imaging
| |
armadillo | 8.500.1 | Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use
| |
arpack-ng | 3.5.0 | ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems
| |
aspect | 2.1.0-pre 2.0.1 2.0.0 | Finite element parallel code to simulate problems in thermal convection in both 2D and 3D models
| |
aspera-client | 3.8.1 | Command-line interface for Aspera, a data transport and streaming technology
| |
autotools | 2017 | The standard GNU build tools: autoconf, automake and libtool
| |
bayestraits | 3.0.1 | BayesTraits is a computer package for performing analyses of trait evolution among groups of species for which a phylogeny or sample of phylogenies is available
| |
bazel | 0.15.0 0.11.1 | Bazel is a build tool that builds code quickly and reliably
| |
bedops | 2.4.35 | BEDOPS is an open-source command-line toolkit that performs highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale
| |
bedtools | 2.27.1 | The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage
| |
blast+ | 2.7.1 | Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences
| |
boost | 1.67.0 1.66.0 1.63.0 | Boost provides free peer-reviewed portable C++ source libraries
| |
boost-mpi | 1.67.0 | Boost provides free peer-reviewed portable C++ source libraries
| |
bwa | 0.7.17 | Burrows-Wheeler Aligner (BWA) is an efficient program that aligns relatively short nucleotide sequences against a long reference sequence such as the human genome
| |
cdo | 1.9.4 | CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data
| |
cereal | 1.2.2 | A C++11 library for serialization
| |
cfitsio | 3.430 | CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format
| |
chaiscript | 6.1.0 | Embedded Scripting Language Designed for C++
| |
cmake | 3.11.1 3.11.0 3.10.3 | CMake, the cross-platform, open-source build system
| |
cp2k | 6.1 | CP2K is a freely available (GPL) program, written in Fortran 95, to perform atomistic and molecular simulations of solid state, liquid, molecular and biological systems
| |
dakota-mpi | 6.7.0 | The Dakota project delivers both state-of-the-art research and robust, usable software for optimization and Unicertainly Quantification
| |
ddt | 19.1 | Parallel Debugging with DDT | DDT debugger and MAP profiler
|
diamond | 0.9.23 | Accelerated BLAST compatible local sequence aligner
| |
eigen | 3.3.4 | Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms
| |
elpa | 2018.05.001 2017.05.003 2016.05.003 | Eigenvalue SoLvers for Petaflop-Applications
| |
esmf | 7.1.0r | The Earth System Modeling Framework (ESMF) is software for building and coupling weather, climate, and related models
| |
fastme | 2.1.6.1 | FastME: a comprehensive, accurate and fast distance-based phylogeny inference program
| |
fenics | 2018.1.0 2017.2.0 | FEniCS is a computing platform for solving partial differential equations
| |
fetk | 1.5 | The Finite Element ToolKit is a collaboratively developed, evolving collection of adaptive finite element method software libraries and tools for solving coupled systems of nonlinear geometric partial differential equations
| |
ffmpeg | 3.4.2 | A complete, cross-platform solution to record, convert and stream audio and video
| |
fftw | 3.3.7 | FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data
| |
fftw-mpi | 3.3.7 | FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data
| |
fmt | 4.1.0 3.0.2 | fmt (formerly cppformat) is an open-source formatting library
| |
foam-extend | 4.0 | The foam-extend project is a fork of the OpenFOAM open source library for Computational Fluid Dynamics
| |
freesurfer | 6.0.0 5.3.0 | FreeSurfer is a set of tools for analysis and visualization of structural and functional brain imaging data
| |
gamess | 14Feb2018 | GAMESS | General Atomic and Molecular Electronic Structure System is a general ab initio quantum chemistry package
|
gc | 7.6.6 | The Boehm-Demers-Weiser conservative garbage collector can be used as a garbage collecting replacement for C malloc or C++ new
| |
gcc | 7.3.0 4.9.4 | Niagara Quickstart | The GNU Compiler Collection C, C++, and Fortran
|
gdb | 8.1 | Performance And Debugging Tools: Niagara | The GNU Project Debugger
|
git | 2.16.3 | Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency
| |
glib | 2.22.5 | GLib is one of the base libraries of the GTK+ project
| |
g_mmpbsa | 5.1.2 | Molecular mechanics/Poisson-Bolzmann surface area method for GROMACS
| |
gmp | 6.1.2 | GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers
| |
gnu-parallel | 20180322 | Running Serial Jobs on Niagara | GNU parallel is a shell tool for executing (usually serial) jobs in parallel
|
gnuplot | 5.2.2 | Portable interactive, function plotting utility
| |
googletest | 1.8.0 | Google's C++ test framework
| |
gromacs | 5.1.4 2019.1 2016.5-plumed-2.4.1 2016.5 | GROMACS | GROMACS is a versatile package to perform molecular dynamics, i
|
gsl | 2.4 | The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers
| |
guile | 2.2.3 | Guile is a programming language, designed to help programmers create flexible applications that can be extended by users or other programmers with plug-ins, modules, or scripts
| |
harminv | 1.4.1 | Harminv is a free program (and accompanying library) to solve the problem of harmonic inversion - given a discrete-time, finite-length signal that consists of a sum of finitely-many sinusoids (possibly exponentially decaying) in a given bandwidth, it determines the frequencies, decay constants, amplitudes, and phases of those sinusoids
| |
hdf5 | 1.8.20 1.10.2 | HDF5 | HDF5 is a data model, library, and file format for storing and managing data
|
hdf5-mpi | 1.8.20 1.10.2 | HDF5 | HDF5 is a data model, library, and file format for storing and managing data
|
hisat2 | 2.1.0 | HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome)
| |
hpcx | 2.2-mofed-4.4 | Mellanox HPC-X Software Toolkit
| |
hpn-ssh | 7.7p1-14v15 | Optimized ssh protocol
| |
htseq | 0.11.1 | A framework to process and analyze data from high-throughput sequencing (HTS) assays
| |
imake | 1.0.7 | imake is a Makefile-generator that is intended to make it easier to develop software portably for multiple systems
| |
intel | 2018.3 2018.2 2018.1 2017.7 | Niagara Quickstart | Intel compilers suite for C, C++, and Fortran, including the MKL, TBB, IPP, DAAL, and PSTL libraries
|
intelmpi | 2018.3 2018.2 2018.1 2017.7 | Niagara Quickstart | Intel MPI library with compiler wrappers for C, C++, and Fortran
|
intel-mpi-benchmarks | 2018.1 | a set of elementary benchmarks that conform to MPI-1, MPI-2, and MPI-3 standard
| |
intelpython2 | 2018.2 | Python | Intel Python distribution for python 2, based on anaconda
|
intelpython3 | 2018.2 | Python | Intel Python distribution for python 3, based on anaconda
|
itk | 4.13.0 | Insight Segmentation and Registration Toolkit (ITK) provides an extensive suite of software tools for registering and segmenting multidimensional imaging data
| |
jasper | 2.0.14 | The JasPer Project is an open-source initiative to provide a free software-based reference implementation of the codec specified in the JPEG-2000 Part-1 standard
| |
java | 1.8.0_162 | Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers
| |
julia | 1.1.0 1.0.0 | A high-level, high-performance dynamic language for technical computing
| |
lammps | 22Sep2017 11May2018 | The 'Large-scale Atomic/Molecular Massively Parallel Simulator' is a classical molecular dynamics simulation
| |
libatomic_ops | 7.6.4 | C/C++ Library for semi-portable access to hardware-provided atomic memory update operations on a number of architectures
| |
libconfig | 1.7.2 | Libconfig is a simple library for processing structured configuration files
| |
libctl | 4.1.2 4.0.1 | libctl is a free Guile-based library implementing flexible control files for scientific simulations
| |
libevent | 2.1.8 | The libevent API provides a mechanism to execute a callback function when a specific event occurs on a file descriptor or after a timeout has been reached
| |
libffi | 3.2.1 | The libffi library provides a portable, high level programming interface to various calling conventions
| |
libint | 1.1.6 1.1.5 | Libint library is used to evaluate the traditional (electron repulsion) and certain novel two-body matrix elements (integrals) over Cartesian Gaussian functions used in modern atomic and molecular theory
| |
libtiff | 4.0.9 | tiff: Library and tools for reading and writing TIFF data files
| |
libunistring | 0.9.9 | This library provides functions for manipulating Unicode strings and for manipulating C strings according to the Unicode standard
| |
libxc | 4.0.5 4.0.3 3.0.0 | Libxc is a library of exchange-correlation functionals for density-functional theory
| |
libxslt | 1.1.32 | Libxslt is the XSLT C library developed for the GNOME project (but usable outside of the Gnome platform)
| |
libxsmm | 1.9 | LIBXSMM is a library for small dense and small sparse matrix-matrix multiplications targeting Intel Architecture (x86)
| |
libyaml | 0.1.7 | LibYAML is a YAML 1
| |
lmdb | 0.9.22 | OpenLDAP's Lightning Memory-Mapped Database (LMDB) library
| |
makedepend | 1.0.5 | The makedepend package contains a C-preprocessor like utility to determine build-time dependencies
| |
mcl | 14-137 | The MCL algorithm is short for the Markov Cluster Algorithm, a fast and scalable unsupervised cluster algorithm for graphs (also known as networks) based on simulation of (stochastic) flow in graphs
| |
mcr | R2018a | MATLAB | The MATLAB Runtime is a standalone set of shared libraries that enables the execution of compiled MATLAB applications or components on computers that do not have MATLAB installed
|
meep | 1.5.0 1.4.3 | Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems
| |
meep-mpi | 1.5.0 1.4.3 | Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems
| |
mercurial | 4.6 | Mercurial is a free, distributed source control management tool
| |
metis | 5.1.0 | METIS is a set of serial programs for partitioning graphs, partitioning finite element meshes, and producing fill reducing orderings for sparse matrices
| |
mkl | 2018.3 2018.2.lua 2018.2 2017.7 | Niagara Quickstart | Intel Math Kernel Library
|
mmseqs2 | 7-4e23d | MMseqs2: ultra fast and sensitive search and clustering suite
| |
mosh | 1.3.2 | Remote terminal application that allows roaming, supports intermittent connectivity, and provides intelligent local echo and line editing of user keystrokes
| |
mpb | 1.6.2 | MIT Photonic-Bands: computation of photonic band structures in periodic media
| |
mpb-mpi | 1.6.2 | MIT Photonic-Bands: computation of photonic band structures in periodic media
| |
mpfr | 4.0.1 | The MPFR library is a C library for multiple-precision floating-point computations with correct rounding
| |
mumps | 5.1.2 | A parallel sparse direct solver
| |
mysql | 8.0.13 | MySQL is (as of March 2014) the world's second most widely used open-source relational database management system (RDBMS)
| |
namd | 2.13 | NAMD | NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems
|
ncl | 6.4.0 | NCL is an interpreted language designed specifically for scientific data analysis and visualization
| |
nco | 4.7.6 4.7.4 | Python bindings for NCO
| |
ncview | 2.1.7 | Ncview is a visual browser for netCDF format files
| |
netcdf | 4.6.1 | NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data
| |
netcdf-mpi | 4.6.1 | NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data
| |
neuron | 7.6.2 | Empirically-based simulations of neurons and networks of neurons
| |
octave | 4.4.0 | Octave | GNU Octave is a high-level interpreted language, primarily intended for numerical computations
|
openblas | 0.2.20 | OpenBLAS is an optimized BLAS library based on GotoBLAS2 1
| |
opencv | 4.1.0 2.4.13.6 | OpenCV (Open Source Computer Vision Library) is an open source computer vision and machine learning software library
| |
openfoam | 6 5.0-debug 5.0 4.1 18.12 18.06 17.12 | OpenFOAM is a free, open source CFD software package
| |
openmpi | 3.1.1 3.1.0rc4 3.1.0rc3 3.1.0 3.0.2 3.0.1 2.1.4 2.1.3 1.10.7 | Niagara Quickstart | The Open MPI Project is an open source MPI-2 implementation
|
orthofinder | 2.2.7 | Program for identifying orthologous protein sequence families
| |
osu-micro-benchmarks | 5.4.3 | OSU Micro-Benchmarks
| |
paraview | 5.5.0 | Visualization | ParaView is a scientific parallel visualizer
|
paraview-offscreen | 5.6.0 | Visualization | Off-screen rendering with ParaView, a scientific parallel visualizer
|
parmetis | 4.0.3 | ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices
| |
perf-reports | 18.2 | ARM performance reports
| |
perl | 5.26.1 5.20.3 | Larry Wall's Practical Extraction and Report Language
| |
petsc | 3.9.2 3.8.4-debug 3.8.4 | PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations
| |
pgplot | 5.2.2-x 5.2.2 | Graphics subroutine library for C/C++ and Fortran
| |
pism | 1.0 | Parallel Ice Sheet Model is open source and capable of high resolution
| |
plink | 1.07 | PLINK is a whole-genome association analysis toolset
| |
plumed | 2.4.1 | PLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines
| |
pnetcdf | 1.9.0 | Parallel netCDF: A Parallel I/O Library for NetCDF File Access
| |
protobuf | 3.6.1 | Google Protocol Buffers
| |
python | 3.6.5 2.7.15 2.7.14 | Python | Python is a programming language that lets you work more quickly and integrate your systems more effectively
|
qbatch | 2.1 | qbatch is a tool for executing commands in parallel across a compute cluster
| |
qhull | 2015.2 | Qhull computes the convex hull, Delaunay triangulation, Voronoi diagram, halfspace intersection about a point, furthest-site Delaunay triangulation, and furthest-site Voronoi diagram
| |
qt | 5.11.1 | Qt is a comprehensive cross-platform C++ application framework
| |
quantum-espresso | 6.3 6.2.1 | An integrated suite of Open-Source computer codes for electronic-structure calculations and materials modeling at the nanoscale
| |
r | 3.5.1 3.5.0 | R is a free software environment for statistical computing and graphics
| |
rarray | 1.2 | Library for runtime multi-dimensional arrays in C++
| |
rsync | 3.1.3 | Data Management | Fast, versatile, remote file-copying tool
|
rtk | 1.4.0 | An open-source and cross-platform software for fast circular cone-beam CT reconstruction based on the Insight Toolkit
| |
rust | 1.28.0 1.26.1 | Rust is a systems programming language that runs blazingly fast, prevents segfaults, and guarantees thread safety
| |
samtools | 1.8 | SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
| |
scalapack | 2.0.2 | The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers
| |
scons | 3.0.1 | SCons is a software construction tool
| |
scotch | 6.0.6 | Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning
| |
shengbte | 1.1.1 | Software package for solving the Boltzmann Transport Equation for phonons
| |
silo | 4.10.2-bsd | Silo is a library for reading and writing a wide variety of scientific data to binary, disk files
| |
singularity | 2 (=2.6.1) | Singularity | Singularity is a portable application stack packaging and runtime utility.
|
spades | 3.13.0 | Genome assembler for single-cell and isolates data sets
| |
spglib | 1.10.3 | Spglib is a C library for finding and handling crystal symmetries
| |
sqlite | 3.23.0 | SQLite: SQL Database Engine in a C Library
| |
stacks | 2.2 | Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform
| |
star | 2.6.1b | STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays
| |
stringtie | 1.3.5 | StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts
| |
su2 | 6.1.0 6.0.0 5.0.0 | An open-source collection of software tools written in C++ for performing Partial Differential Equation (PDE) analysis and solving PDE-constrained optimization problems
| |
subversion | 1.9.7 | Subversion is an open source version control system
| |
sundials | 3.1.0 2.7.0 2.6.0 | SUNDIALS: SUite of Nonlinear and DIfferential/ALgebraic Equation Solvers
| |
sundials-mpi | 3.1.0 | SUNDIALS: SUite of Nonlinear and DIfferential/ALgebraic Equation Solvers
| |
swig | 3.0.12 | SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages
| |
thirdorder | 1.1.1 | Set of scripts to help users of ShengBTE and almaBTE create FORCE_CONSTANTS_3RD files in an efficient and convenient manner
| |
trilinos | 12.12.1 | The Trilinos Project is an effort to develop algorithms and enabling technologies within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems
| |
trinityrnaseq | 2.8.1 | Trinity RNA-Seq de novo transcriptome assembly
| |
udunits | 2.2.26 | UDUNITS supports conversion of unit specifications between formatted and binary forms, arithmetic manipulation of units, and conversion of values between compatible scales of measurement
| |
valgrind | 3.14.0 3.13.0 | Introduction To Performance | Valgrind provides debugging and profiling tools
|
visit | 2.13.1 | Visualization | An open-source, interactive, scalable, visualization, animation and analysis tool
|
vmd | 1.9.4a12 | Visualization | VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting
|
vtk | 8.1.1 | The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, image processing and visualization
|
2019b
Module | Versions (2019b) | Documentation | Description |
---|---|---|---|
ants | 2.3.1 | ANTs extracts information from complex datasets that include imaging
| |
autotools | 2018b 2018 | The standard GNU build tools: autoconf, automake and libtool
| |
boost | 1.69.0 | Boost provides free peer-reviewed portable C++ source libraries
| |
cfitsio | 3.450 | CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format
| |
cmake | 3.13.4 | CMake, the cross-platform, open-source build system
| |
ddt | 19.1 | Parallel Debugging with DDT | DDT debugger and MAP profiler
|
eigen | 3.3.7 | Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms
| |
ffmpeg | 3.4.2 | A complete, cross-platform solution to record, convert and stream audio and video
| |
fftw | 3.3.8 | FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data
| |
gcc | 8.3.0 | Niagara Quickstart | The GNU Compiler Collection C, C++, and Fortran
|
gdal | 2.4.1 | GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation
| |
geos | 3.7.1 | GEOS (Geometry Engine - Open Source) is a C++ port of the Java Topology Suite (JTS)
| |
git | 2.21.0 | Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency
| |
gmp | 6.1.2 | GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers
| |
gnu-parallel | 20190322 | Running Serial Jobs on Niagara | GNU parallel is a shell tool for executing (usually serial) jobs in parallel
|
gromacs | 2018.6 | GROMACS | GROMACS is a versatile package to perform molecular dynamics, i
|
gsl | 2.5 | The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers
| |
hdf5 | 1.8.21 1.10.5 | HDF5 | HDF5 is a data model, library, and file format for storing and managing data
|
intel | 2019u4 2019u3 | Niagara Quickstart | Intel compilers suite for C, C++, and Fortran, including the MKL, TBB, IPP, DAAL, and PSTL libraries
|
intelmpi | 2019u4 2019u3 | Niagara Quickstart | Intel MPI library with compiler wrappers for C, C++, and Fortran
|
intelpython2 | 2019u4 2019u3 | Python | Intel Python distribution for python 2, based on anaconda
|
intelpython3 | 2019u4 2019u3 | Python | Intel Python distribution for python 3, based on anaconda
|
itk | 4.13.2 | Insight Segmentation and Registration Toolkit (ITK) provides an extensive suite of software tools for registering and segmenting multidimensional imaging data
| |
java | 1.8.0_201 | Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers
| |
julia | 1.1.0 | A high-level, high-performance dynamic language for technical computing
| |
mkl | 2019u4 2019u3 | Niagara Quickstart | Intel Math Kernel Library
|
mpfr | 4.0.2 | The MPFR library is a C library for multiple-precision floating-point computations with correct rounding
| |
netcdf | 4.6.3 | NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data
| |
openmpi | 4.0.1 3.1.3 | Niagara Quickstart | The Open MPI Project is an open source MPI-2 implementation
|
osu-micro-benchmarks | 5.6.1 | OSU Micro-Benchmarks
| |
perl | 5.28.1 | Larry Wall's Practical Extraction and Report Language
| |
petsc | 3.10.5 | PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations
| |
pgplot | 5.2.2 | Graphics subroutine library for C/C++ and Fortran
| |
pnetcdf | 1.11.0 | Parallel netCDF: A Parallel I/O Library for NetCDF File Access
| |
proj | 6.0.0 4.9.3 | Cartographic projections and coordinate transformations library
| |
python | 3.6.8 2.7.15 | Python | Python is a programming language that lets you work more quickly and integrate your systems more effectively
|
r | 3.5.3 | R is a free software environment for statistical computing and graphics
| |
samtools | 1.9 | SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
| |
sqlite | 3.23.0 | SQLite: SQL Database Engine in a C Library
| |
swig | 3.0.12 | SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages
| |
trilinos | 12.12.1 | The Trilinos Project is an effort to develop algorithms and enabling technologies within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems
| |
udunits | 2.2.26 | UDUNITS supports conversion of unit specifications between formatted and binary forms, arithmetic manipulation of units, and conversion of values between compatible scales of measurement
| |
valgrind | 3.14.0 | Introduction To Performance | Valgrind-3
|